Immunoproteomics

1. Introduction to the Immune System Scott McComb, Aude Thiriot, Lakshmi Krishnan, and Felicity Stark 2. Immunoproteomics: Current Technology and Applications Kelly M. Fulton and Susan M. Twine 3. Antigen Identification Using SEREX Ugur Sahin and Ozlem Tureci 4. Antigen Discovery Using Whole-Genome Phage Display Libraries Elisa Beghetto and Nicola Gargano 5. Methods and Applications of Serological Proteome Analysis Kelly M. Fulton, Shannon S. Martin, Lawrence Wolfraim, and Susan M. Twine 6. Pre-Absorbed Immunoproteomics: A Novel Method for the Detection of Bacterial Surface Proteins Guangjin Liu, Wei Zhang, and Chengping Lu 7. Identification of the Antigen Content of Electroimmunoprecipitates N. Helena Beyer and Niels H.H. Heegaard 8. An Immunoproteomics Approach to Screen the Antigenicity of the Influenza Virus Kevin M. Downard 9. In Vivo Microbial Antigen Discovery (InMAD) to Identify Diagnostic Proteins and Polysaccharides that Are Circulating During Microbial Infections Sindy J. Chaves, Kathleen Schegg, Thomas R. Kozel, and David P. AuCoin 10. Chemo-Enzymatic Production of O-Glycopeptides for the Detection of Serum Glycopeptide Antibodies Alexander Nostdal and Hans H. Wandall 11. Enrichment and Characterization of Glycopeptide Epitopes from Complex Mixtures Luc Tessier, Kelly M. Fulton, and Susan M. Twine 12. Whole-Cell MALDI-TOF Mass Spectrometry: A Tool for Immune Cell Analysis and Characterization Richard Ouedraogo, Julien Textoris, Aurelie Daumas, Christian Capo, and Jean-Louis Mege 13. Cell-Based Arrays for the Identification of Interacting Polypeptide Domains or Epitopes Richard H. Maier, Christina J. Maier, and Kamil Onder 14. Identification and Quantitation of MHC Class II-Bound Peptides from Mouse Spleen Dendritic Cells by Immunoprecipitation and Mass Spectrometry Analysis Leonia Bozzacco and Haiqiang Yu 15. Construction and Screening of an Antigen-Derived Peptide Library Displayed on Yeast Cell Surface for CD4+ T Cell Epitope Identification Fei Wen and Huimin Zhao 16. Profiling of Cytokine and Chemokine Responses Using Multiplex Bead Array Technology Greg Harris and Wangxue Chen 17. Preparation of the Low Molecular Weight Serum Proteome for Mass Spectrometry Analysis Timothy J. Waybright, King C. Chan, Timothy D. Veenstra, and Zhen Xiao 18. Identification of Protein Biomarkers in Human Serum Using iTRAQ and Shotgun Mass Spectrometry Theodoros A. Koutroukides, Julian A.J. Jaros, Bob Amess, Daniel Martins-de-Souza, Paul C. Guest, Hassan Rahmoune, Yishai Levin, Mike Deery, Philip D. Charles, Svenja Hester, Arnoud Groen, Andy Christoforou, Julie Howard, Nick Bond, Sabine Bahn, and Kathryn S. Lilley 19. Genome-Based Bioinformatic Prediction of Major Histocompatibility Complex (MHC) Epitopes Simon J. Foote 20. Structure-Based Prediction of Major Histocompatibility Complex (MHC) Epitopes Andrew J. Bordner 21. Prioritization of Therapeutic Targets of Inflammation Using Proteomics, Bioinformatics, and In Silico Cell-Cell Interactomics Arsalan S. Haqqani and Danica B. Stanimirovic 22. Commercial Considerations for Immunoproteomics Scott M. Ferguson